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First-in-human prospective trial of sonobiopsy in high-grade glioma patients using neuronavigation-guided focused ultrasound.

Authors: Yuan J, Xu L, Chien CY, Yang Y, Yue Y, Fadera S, Stark AH, Schwetye KE, Nazeri A, Desai R, Athiraman U, Chaudhuri AA, Chen H, Leuthardt EC

Sonobiopsy is an emerging technology that combines focused ultrasound (FUS) with microbubbles to enrich circulating brain disease-specific biomarkers for noninvasive molecular diagnosis of brain diseases. Here, we report the first-in-human prospective trial of sonobiopsy in high-grade glioma patients to evaluate its feasibility and safety in enriching plasma circulating tumor biomarkers. A nimble FUS device integrated with a clinical neuronavigation system was used to perform sonobiopsy following an established clinical workflow for neuronavigation. Analysis of blood samples collected before and after FUS sonication showed that sonobiopsy enriched plasma circulating tumor DNA (ctDNA), including a maximum increase of 1.6-fold for the mononucleosome cell-free DNA (cfDNA) fragments (120-280 bp), 1.9-fold for the patient-specific tumor variant ctDNA level, and 5.6-fold for the TERT mutation ctDNA level. Histological analysis of surgically resected tumors confirmed the safety of the procedure. Transcriptome analysis of sonicated and nonsonicated tumor tissues found that FUS sonication modulated cell physical structure-related genes. Only 2 out of 17,982 total detected genes related to the immune pathways were upregulated. These feasibility and safety data support the continued investigation of sonobiopsy for noninvasive molecular diagnosis of brain diseases.

Introduction

Purpose Sonobiopsy
Study Objective To evaluate the feasibility and safety of sonobiopsy using a neuronavigation-integrated focused ultrasound device to enrich plasma circulating tumor biomarkers in patients with high-grade glioma.
Animal model / Human subject Homo sapiens (human patients, high-grade glioma); strain: N/A; age: not specified; sex: not specified
Disease model high-grade glioma
MRI or image guidance method Neuronavigation-guided using MRI and CT
Targeted brain region(s) High-Grade Glioma (Brain Tumor)

Outcomes and Safety

Summary of Outcomes Sonobiopsy safely increased circulating brain tumor biomarkers, including cfDNA, personalized ctDNA, and TERT-mutant ctDNA, with biomarker enrichment detected within 30 min after treatment and no evidence of tissue damage.
Duration of biological effect 30 min
Safety-related matter Histological analysis of surgically resected tumors confirmed no evidence of tissue damage from sonobiopsy, and transcriptome analysis showed minimal immune/inflammatory response (only three immune-related DEGs out of 17,982); no adverse effects were reported in this pilot study.

Brain Region

Ultrasound Parameters

Ultrasound instrument Focused ultrasound (FUS) transducer (Imasonics, Voray-sur-l’Ognon, France) — 15 concentric ring transducers, center frequency 650 kHz; aperture 65 mm, focal distance 65 mm (f-number = 1). Driven by a commercial FUS system (Image Guided Therapy, Pessac, France). Coupled to a Stealth S8 passive blunt probe (Medtronic) via a customized adapter.
FUS Frequency 650 kHz
FUS Mode pulsed
Pulse duration 10 ms
Duration of a single FUS session 3 minutes
Focal Characteristics Focal depth: 80 mm; Focal length: 20 mm; Aperture size: 65 mm
Treatment frequency Single session

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